Functions that create habitat estimates given flow and some additional helper functions.
set_spawning_habitat()
Set Spawning Habitat Area
set_instream_habitat()
Set Instream Habitat Area
set_floodplain_habitat()
Set Floodplain Habitat Area
set_bypass_habitat()
Set Bypass Habitat Area
wua_to_area()
WUA to Area in Square Meters
apply_suitability()
Apply Suitability Factor
square_meters_to_acres()
Square Meters to Acres
acres_to_square_meters()
Acres to Square Meters
get_weeks_flooded()
Duration of Floodplain Inundation
get_habitat_selector()
Get Habitat Selector
Flow to area rearing and spawning modeled relationships
habitat_data american_river_instream american_river_floodplain antelope_creek_floodplain battle_creek_instream battle_creek_floodplain bear_creek_floodplain bear_river_instream bear_river_floodplain big_chico_creek_floodplain butte_creek_instream butte_creek_floodplain calaveras_river_instream calaveras_river_floodplain clear_creek_instream clear_creek_floodplain cosumnes_river_instream cosumnes_river_floodplain cottonwood_creek_instream cottonwood_creek_floodplain cow_creek_instream cow_creek_floodplain deer_creek_floodplain elder_creek_floodplain feather_river_instream feather_river_floodplain merced_river_instream merced_river_floodplain mill_creek_floodplain mokelumne_river_instream mokelumne_river_floodplain paynes_creek_floodplain san_joaquin_river_instream san_joaquin_river_floodplain stanislaus_river_instream stanislaus_river_floodplain stony_creek_floodplain thomes_creek_floodplain tuolumne_river_instream tuolumne_river_floodplain yuba_river_instream yuba_river_floodplain upper_mid_sac_region_instream
habitat_data
american_river_instream
american_river_floodplain
antelope_creek_floodplain
battle_creek_instream
battle_creek_floodplain
bear_creek_floodplain
bear_river_instream
bear_river_floodplain
big_chico_creek_floodplain
butte_creek_instream
butte_creek_floodplain
calaveras_river_instream
calaveras_river_floodplain
clear_creek_instream
clear_creek_floodplain
cosumnes_river_instream
cosumnes_river_floodplain
cottonwood_creek_instream
cottonwood_creek_floodplain
cow_creek_instream
cow_creek_floodplain
deer_creek_floodplain
elder_creek_floodplain
feather_river_instream
feather_river_floodplain
merced_river_instream
merced_river_floodplain
mill_creek_floodplain
mokelumne_river_instream
mokelumne_river_floodplain
paynes_creek_floodplain
san_joaquin_river_instream
san_joaquin_river_floodplain
stanislaus_river_instream
stanislaus_river_floodplain
stony_creek_floodplain
thomes_creek_floodplain
tuolumne_river_instream
tuolumne_river_floodplain
yuba_river_instream
yuba_river_floodplain
upper_mid_sac_region_instream
Habitat Data
sacramento_habitat upper_sac_ACID_boards_in upper_sac_ACID_boards_out upper_sacramento_river_instream upper_sacramento_river_floodplain upper_mid_sacramento_river_instream upper_mid_sacramento_river_floodplain lower_mid_sacramento_river_instream lower_mid_sacramento_river_floodplain lower_sacramento_river_instream lower_sacramento_river_floodplain
sacramento_habitat
upper_sac_ACID_boards_in
upper_sac_ACID_boards_out
upper_sacramento_river_instream
upper_sacramento_river_floodplain
upper_mid_sacramento_river_instream
upper_mid_sacramento_river_floodplain
lower_mid_sacramento_river_instream
lower_mid_sacramento_river_floodplain
lower_sacramento_river_instream
lower_sacramento_river_floodplain
Mainstem Sacramento River Habitat Data
bypass_habitat yolo_bypass_habitat sutter_bypass_habitat
bypass_habitat
yolo_bypass_habitat
sutter_bypass_habitat
Bypass Flow to Habitat Area Relationships
Datasets used as reference tables
modeling_exist
Habitat Modeling Status
watershed_lengths
Habitat Extent Lengths
weeks_inundated
Flow Thresholds for Number of Weeks Inundated
inchannel_habitat_adult
Steelhead Adult Rearing Habitat
pools
Pool Area
spawning_decay_multiplier
Spawning Decay Multipliers
spawning_habitat_average
Spawning Habitat Average
watershed_decay_status
Watershed Decay Status
watershed_spawning_decays
Watershed Spawning Habitat Decays
Data used directly as inputs to the DSM model
fr_fry wr_fry sr_fry st_fry lfr_fry
fr_fry
wr_fry
sr_fry
st_fry
lfr_fry
Fry Inchannel Habitat
fr_juv wr_juv sr_juv st_juv lfr_juv
fr_juv
wr_juv
sr_juv
st_juv
lfr_juv
Juvenile Inchannel Habitat
fr_spawn wr_spawn sr_spawn st_spawn lfr_spawn
fr_spawn
wr_spawn
sr_spawn
st_spawn
lfr_spawn
Spawning Habitat
fr_fp wr_fp sr_fp st_fp lfr_fp
fr_fp
wr_fp
sr_fp
st_fp
lfr_fp
Floodplain Habitat
weeks_flooded
Floodplain Habitat Activation Duration
delta_habitat
Delta Habitat Array
sutter_habitat yolo_habitat
sutter_habitat
yolo_habitat
Bypass Habitat Area
tisdale_bypass_watershed yolo_bypass_watershed south_delta_routed_watersheds
tisdale_bypass_watershed
yolo_bypass_watershed
south_delta_routed_watersheds
Watershed Routing
prop_high_predation prob_strand_early prob_strand_late prob_nest_scoured
prop_high_predation
prob_strand_early
prob_strand_late
prob_nest_scoured
Expert Estimated Probabilities
contact_points delta_contact_points
contact_points
delta_contact_points
Number of Contact Points
delta_prop_high_predation
Probability High Predation in the Deltas